Colocalization map

While a colocalization coefficient quantifies the level of overlap between two whole channels, a colocalization map displays the value of a specific colocalization coefficient for each voxel of the two channels.

Therefore, a colocalization map is a 3D image of the level of overlap between the two channels, according to a specific coefficient.

It is possible to choose between the 4 most broadly used colocalization maps. The maps will be displayed along with the colocalization reports after the job is finished.

Note

The colocalization maps helps us to assess the colocalization regions visually.

As an example the below figure shows the deconvolution result of channels 0 and 3 next to the colocalization map (Pearson coefficient) of the same channels.